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Version 1.6.0 release PR - "Adaptable adenine" #16

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Merged
MatthiasZepper merged 21 commits into from
Nov 26, 2025
Merged

Version 1.6.0 release PR - "Adaptable adenine" #16

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e318557
Upgrade GitHub Artifact Action to version 4.
MatthiasZepper Nov 9, 2024
35a43d5
Add new argument to external to choose the UMI destination.
MatthiasZepper Nov 13, 2024
67d6464
Allow variable UMI Destinations in umi_external.rs
MatthiasZepper Nov 13, 2024
c54f8b7
Ugly concat implementation for UMIs.
MatthiasZepper Nov 13, 2024
75ee4b3
Bugfix for qualities in inline mode.
MatthiasZepper Nov 13, 2024
bae41cf
Linting
MatthiasZepper Nov 14, 2024
3f77799
Add unit tests for new read_editing.rs file.
MatthiasZepper Dec 10, 2024
5dbb24e
Rename the integration test variables to include header, so the inlin…
MatthiasZepper Feb 3, 2025
ae97107
Extend the tests for the new external inline functionality.
MatthiasZepper Feb 4, 2025
609d2f9
Duplicate the integration tests for ExternalHeader to ExternalInline.
MatthiasZepper Feb 4, 2025
57b4bf4
Modify README to reflect the new inline capability.
MatthiasZepper Feb 4, 2025
47b6740
Upgrade build dependencies.
MatthiasZepper Feb 4, 2025
ad5088e
Lint the external filecontent integration tests.
MatthiasZepper Feb 4, 2025
6dc257c
Remove Rust marker for linting (unmaintained).
MatthiasZepper Nov 5, 2025
337c49a
Merge pull request #15 from MatthiasZepper/external_inline
MatthiasZepper Nov 5, 2025
32eb2fa
Bump dependencies.
MatthiasZepper Nov 5, 2025
67796eb
Upgrade the assert_cmd crate and tests.
MatthiasZepper Nov 5, 2025
0e12526
Linting
MatthiasZepper Nov 5, 2025
cfa18d4
Update Docker base images from Debian Bookworm to Trixie.
MatthiasZepper Nov 5, 2025
6e1e049
README updates
MatthiasZepper Nov 10, 2025
3c894dd
Replace Vec::with_capacity() with String::with_capacity() in read_edi…
MatthiasZepper Nov 10, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/release.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -160,7 +160,7 @@ jobs:

- name: Create artifact from binary
if: (github.event_name == 'push' || github.event_name == 'pull-request' || github.event_name == 'workflow_dispatch' ) && github.event.ref == 'refs/heads/main'
uses: actions/upload-artifact@v3
uses: actions/upload-artifact@v4
with:
name: ${{ env.ASSET }}
path: ${{ env.ASSET }}
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3 changes: 0 additions & 3 deletions .github/workflows/testing.yml
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Expand Up @@ -40,9 +40,6 @@ jobs:
- name: Check style
run: cargo fmt -- --check

- name: Lint with Rust Marker
uses: rust-marker/marker@v0.5

test:
runs-on: ubuntu-latest

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