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    14 repositories

    • phylotyprrefdata

      Public
      Provides the RDP trainset19 16S rRNA Sequence Reference
      R
      •
      Other
      •1•1•0•0•Updated Oct 23, 2026Oct 23, 2026

    • strollur

      Public
      Store and transfer the data associated with your amplicon sequence analysis. This includes nucleotide sequences, abundance, sample and treatment assignments, ta…
      asvotusamplicon-sequencing
      asvotusamplicon-sequencingphylogenetic-analysis
      R
      •
      GNU General Public License v3.0
      •0•0•8•0•Updated Oct 21, 2026Oct 21, 2026

    • rchime

      Public
      Detect and remove chimeras from your amplicon sequence analysis using reference based or denovo approaches.
      chimeraamplicon-sequencing
      chimeraamplicon-sequencing
      C++
      •
      Other
      •0•0•3•0•Updated Oct 21, 2026Oct 21, 2026

    • phylotypr

      Public
      Tools for Classifying DNA Sequences
      R
      •
      GNU General Public License v3.0
      •4•10•1•0•Updated Oct 21, 2026Oct 21, 2026

    • mothur

      Public
      Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The Universi…
      C++
      •
      GNU General Public License v3.0
      •111•279•18•0•Updated Aug 21, 2026Aug 21, 2026

    • mothur.github.io

      Public
      wiki for the mothur software package
      CSS
      •
      Creative Commons Attribution 4.0 International
      •24•25•29•2•Updated Apr 28, 2026Apr 28, 2026

    • mothurblog.github.io

      Public
      A semi-quantitative discussion of issues in microbial ecology
      CSS
      •
      MIT License
      •0•0•0•0•Updated Mar 13, 2024Mar 13, 2024

    • logo

      Public
      official mothur logo
      GNU General Public License v2.0
      •0•0•0•0•Updated Apr 5, 2022Apr 5, 2022

    • mothur_ami

      Public
      Repository to create and maintain an Amazon AMI for mothur
      MIT License
      •1•0•0•0•Updated May 7, 2019May 7, 2019

    • vsearch

      Public
      Versatile open-source tool for metagenomics
      C++
      •
      Other
      •137•1•0•0•Updated Mar 22, 2016Mar 22, 2016

    • slibshuff

      Public
      The original source code for the s-libshuff program (for historical purposes)
      C++
      •
      GNU General Public License v2.0
      •0•1•0•0•Updated Jan 20, 2015Jan 20, 2015

    • TreeClimber

      Public
      Original source code from the TreeClimber program (for historical purposes)
      C++
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Jan 20, 2015Jan 20, 2015

    • SONS

      Public
      Original sources code for the SONS program (for historical purposes)
      C++
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Jan 20, 2015Jan 20, 2015

    • DOTUR

      Public
      The last version of DOTUR that was created (posted for historical reasons)
      C++
      •
      GNU General Public License v2.0
      •1•0•0•0•Updated Jan 20, 2015Jan 20, 2015
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